Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921657.1_cds_XP_016470574.1_63010
CDS Infomation

[gene=LOC107792837] [db_xref=GeneID:107792837] [protein=succinate-semialdehyde dehydrogenase, mitochondrial-like isoform X2] [protein_id=XP_016470574.1] [location=19323..20804] [gbkey=CDS]
Sequence

ATGACGACGGAAGCACAAAGTGTTGCTGCTAAGCTGAAAAGCTCTGGATTGTTGCGGAGT
CAGGCTCTTATTGGAGGGAAATGGGTTGATTCATATGATGGGAAGACTATAAAGGTATAC
AACCCTGCAACAGGAGAGGTAATAACAGATGTGGCATGCATGGGTGGGAAGGAGACAAAT
GATGCAATTTCTTCTGCCTATGATGCATTTAGTTCTTGGAGCAAACTTACTGCTGCTGAA
AGGAGCAAATGTTTAAGGAAGTGGTATGATTTGATAATGGCCCACAAAGAAGAACTTGGA
GAACTAATGACACTAGAGCAAGGGAAGCCTCTAAAAGAGGCTATTGGTGAAGTTAGTTAT
GGGGCTGGTTTTATTGAGTTCTCCGCTGAAGAGGCTAAACGTATATATGGTGACATCATT
CCATCACCATTAGCAGATAGGCGTTTATTTGTTTTAAAGCAACCAGTTGGTGTTGTTGGT
GCAATTACACCTTGGAATTTTCCCTTGGCTATGATTACCCGAAAGGTCGGCCCTGCTCTT
GCTTGTGGTTGTACAGTGGTGATAAAACCTTCTGAACTCACGCCCTTGACTGCTTTAGCA
GCAGCTGAACTCTCCCTTCAAGCTGGAATACCACCGGGCGTGGTGAATGTTGTTATGGGA
AATGCATCTGATATTGGAGATGCACTGCTTGCGAGTCCACAAGTAAGAAAACTTACCTTC
ACAGGTTCGACCATTGTTGGGAAAAAATTAATGGCAGGTGCTGCTGCCACTGTTAAGAAG
GTATCTCTTGAGCTAGGAGGTAATGCACCTTGCATCATCTTTGATGATGCAGACATTGAA
GTAGCTTTGAAAGGAGCTCTGGCAACAAAGTTCCGCAACACTGGACAAACATGCGTATGT
GCCAATAGAATACTTGTGCAAGAAGGGATATATGAAAAATTTGCAAATGCTTTTGCAAAA
GCTGTCCAAAGCATGAAAGTTGGAGATGGTTTCAGTGAAGGCGTGGAGCAGGGACCTCTA
ATTAATGAAGCAGCAGTAAAGAAGGTTGAATCTTTTGTAGAAGACGCTACTTCAAAGGGG
GCCAAAGTCCTCGTTGGGGGGAAGAGACATAGCCTTGGCATGACCTTCTATGAGCCTACA
GTCGTAACTGGAGTTAATAGTGAGATGCTCTTGTCGAGGGAGGAAGTATTTGGGCCTGTC
GCCCCTCTTTTGAAGTTCAAAACAGAGGAAGATGCAATCCATATGGCTAATGACACCAAT
GCAGGTTTAGCTGCTTATATATTCTCGACAAATATTCAAAGAGCTTGGCGTGTCACTGAA
GCTCTTGAATATGGAATCGTTGGAGTTAATGAAGGACTAGTTTCAACTGAGGTAGCTCCA
TTTGGGGGCGTGAAACAATCAGGTCTTGGCCGTGAAGGTTCTAAATACGGGTTGGATGAA
TATTTGGAGATGAAATATGTGTGTTTGGGAAGTATGAGCTAA

Peptide Sequence

PEP ID

XP_016470574.1
PEP Infomation

PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MTTEAQSVAAKLKSSGLLRSQALIGGKWVDSYDGKTIKVYNPATGEVITDVACMGGKETN
DAISSAYDAFSSWSKLTAAERSKCLRKWYDLIMAHKEELGELMTLEQGKPLKEAIGEVSY
GAGFIEFSAEEAKRIYGDIIPSPLADRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPAL
ACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGNASDIGDALLASPQVRKLTF
TGSTIVGKKLMAGAAATVKKVSLELGGNAPCIIFDDADIEVALKGALATKFRNTGQTCVC
ANRILVQEGIYEKFANAFAKAVQSMKVGDGFSEGVEQGPLINEAAVKKVESFVEDATSKG
AKVLVGGKRHSLGMTFYEPTVVTGVNSEMLLSREEVFGPVAPLLKFKTEEDAIHMANDTN
AGLAAYIFSTNIQRAWRVTEALEYGIVGVNEGLVSTEVAPFGGVKQSGLGREGSKYGLDE
YLEMKYVCLGSMS

Transcript Sequence

Gene sequence data has not been registered.